Overlapping paired-ended reads can be merged into consensus sequences and adapter sequence can be found for paired-ended data if not known.Īutomatic Filtering, Trimming, Error Removing and Quality Control for fastq data.īcl2fastq can be used to both demultiplex data and convert BCL files to FASTQ file formats for downstream analysis.īclconvert can be used to both demultiplex data and convert BCL files to FASTQ file formats for downstream analysis.īioBloom Tools assigns reads to different references using bloom filters. Removes adapter sequences and trims low quality bases from the 3' end of reads. If you would like another to be added, please open an issue.Ĭlick the tool name to go to the MultiQC documentation for that tool. MultiQC currently supports 111 bioinformatics tools, listed below.
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